Hi, the active ingredient in both medications is identical to the hormone T4 generated by the human thyroid. Other ingredients are mainly bulking agents, antioxidants, and colouring agents.
Inactive ingredients:
Mylan: butylated hydroxyanisole, colloidal silicon dioxide, crospovidone, magnesium stearate, mannitol, microcrystalline cellulose, povidone, sodium lauryl sulfate, sucrose, colour additives
Sandoz: magnesium stearate, cellulose, microcrystalline, silicon dioxide,
sodium starch glycolate type a potato, colour additives.
Absorption of orally administered T4 from the gastrointestinal tract ranges from 40% to 80%.
Did your TSH and FT4 remain the same after switching to Mylan levothyroxine? If you take the same daily dose of T4 but absorb the new medication better you could end up (borderline) hyperthyroid. In that case, your bone turnover rate increases and you bone mass decreases while Calcium is dumped into your blood stream and eventually eliminated via the kidneys. The surplus of Calcium might cause calcifications e.g. in the kidneys or the urinary tract. Too much thyroxine can also cause muscle wasting.
On the hand, if you absorb less than your required dose of thyroxine you could become hypothyroid. This can also lead to joint and muscle stiffness and pain.
The most important thing is to make sure that your long term thyroid hormone level is within your optimal range. To mitigate side effects of surplus Calcium I would recommend applying Magnesium oil to your legs. Magnesium is absorbed through the skin and reduces the precipitation concentration of Calcium. Alternatively, have regular warm baths to which you add a few cups of Magnesium salts.
Note: If your hypothyroidism is of autoimmune nature then you are at a higher risk (compared to the general population) to develop rheumatoid arthritis. Did you ever have this checked?